Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| BLCA | rs72636675 | chr8:50715047 | G/C | 0 | 211 | 10.13 | 8.4 | 0.1 | KM Plot |
| BLCA | rs72636676 | chr8:50716438 | A/G | 0 | 213 | 10.53 | 7.77 | 0.1 | KM Plot |
| BLCA | rs72636678 | chr8:50716675 | A/T | 0 | 213 | 10.53 | 7.77 | 0.1 | KM Plot |
| BLCA | rs72636684 | chr8:50729328 | C/T | 0 | 214 | 10.53 | 8.08 | 0.1 | KM Plot |
| BLCA | rs72638307 | chr8:50754007 | A/C | 1.84E-5 | 214 | 10.33 | 8.72 | 0.98 | KM Plot |
| BLCA | rs72638311 | chr8:50758066 | G/A | 2.59E-5 | 215 | 10.33 | 9.25 | 1.87 | KM Plot |
| BLCA | rs72638312 | chr8:50758236 | A/T | 2.43E-5 | 216 | 10.53 | 9.05 | 1.87 | KM Plot |
| BLCA | rs72638314 | chr8:50760268 | G/T | 2.43E-5 | 216 | 10.53 | 9.05 | 1.87 | KM Plot |
| BLCA | rs72638319 | chr8:50763871 | T/C | 2.43E-5 | 216 | 10.53 | 9.05 | 1.87 | KM Plot |
| BLCA | rs72638323 | chr8:50765206 | T/C | 2.43E-5 | 216 | 10.53 | 9.05 | 1.87 | KM Plot |
| BLCA | rs72638332 | chr8:50779460 | G/A | 2.65E-5 | 215 | 10.53 | 9.03 | 1.87 | KM Plot |
| BLCA | rs72638338 | chr8:50785212 | T/A | 2.78E-5 | 214 | 10.6 | 9.03 | 1.87 | KM Plot |
| BLCA | rs7284538 | chr22:30375534 | C/T | 3.22E-5 | 216 | 4.73 | 10.12 | 8.7 | KM Plot |
| BLCA | rs72860745 | chr18:5240691 | A/C | 4.47E-5 | 208 | 9.07 | 12.57 | 3.48 | KM Plot |
| BLCA | rs72860746 | chr18:5240709 | T/G | 4.21E-5 | 209 | 9.08 | 12.57 | 3.48 | KM Plot |